GNNRecom/gnnrec/hge/rhgnn/model.py

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import dgl.function as fn
import torch
import torch.nn as nn
import torch.nn.functional as F
from dgl.ops import edge_softmax
from dgl.utils import expand_as_pair
class RelationGraphConv(nn.Module):
def __init__(
self, out_dim, num_heads, fc_src, fc_dst, fc_rel,
feat_drop=0.0, negative_slope=0.2, activation=None):
"""特定关系的卷积
针对一种关系边类型R=<stype, etype, dtype>聚集关系R下的邻居信息得到dtype类型顶点在关系R下的表示
注意力向量使用关系R的表示
:param out_dim: int 输出特征维数
:param num_heads: int 注意力头数K
:param fc_src: nn.Linear(d_in, K*d_out) 源顶点特征转换模块
:param fc_dst: nn.Linear(d_in, K*d_out) 目标顶点特征转换模块
:param fc_rel: nn.Linear(d_rel, 2*K*d_out) 关系表示转换模块
:param feat_drop: float, optional 输入特征Dropout概率默认为0
:param negative_slope: float, optional LeakyReLU负斜率默认为0.2
:param activation: callable, optional 用于输出特征的激活函数默认为None
"""
super().__init__()
self.out_dim = out_dim
self.num_heads = num_heads
self.fc_src = fc_src
self.fc_dst = fc_dst
self.fc_rel = fc_rel
self.feat_drop = nn.Dropout(feat_drop)
self.leaky_relu = nn.LeakyReLU(negative_slope)
self.activation = activation
def forward(self, g, feat, feat_rel):
"""
:param g: DGLGraph 二分图(只包含一种关系)
:param feat: tensor(N_src, d_in) or (tensor(N_src, d_in), tensor(N_dst, d_in)) 输入特征
:param feat_rel: tensor(d_rel) 关系R的表示
:return: tensor(N_dst, K*d_out) 目标顶点在关系R下的表示
"""
with g.local_scope():
feat_src, feat_dst = expand_as_pair(feat, g)
feat_src = self.fc_src(self.feat_drop(feat_src)).view(-1, self.num_heads, self.out_dim)
feat_dst = self.fc_dst(self.feat_drop(feat_dst)).view(-1, self.num_heads, self.out_dim)
attn = self.fc_rel(feat_rel).view(self.num_heads, 2 * self.out_dim)
# a^T (z_u || z_v) = (a_l^T || a_r^T) (z_u || z_v) = a_l^T z_u + a_r^T z_v = el + er
el = (feat_src * attn[:, :self.out_dim]).sum(dim=-1, keepdim=True) # (N_src, K, 1)
er = (feat_dst * attn[:, self.out_dim:]).sum(dim=-1, keepdim=True) # (N_dst, K, 1)
g.srcdata.update({'ft': feat_src, 'el': el})
g.dstdata['er'] = er
g.apply_edges(fn.u_add_v('el', 'er', 'e'))
e = self.leaky_relu(g.edata.pop('e'))
g.edata['a'] = edge_softmax(g, e) # (E, K, 1)
# 消息传递
g.update_all(fn.u_mul_e('ft', 'a', 'm'), fn.sum('m', 'ft'))
ret = g.dstdata['ft'].view(-1, self.num_heads * self.out_dim)
if self.activation:
ret = self.activation(ret)
return ret
class RelationCrossing(nn.Module):
def __init__(self, out_dim, num_heads, rel_attn, dropout=0.0, negative_slope=0.2):
"""跨关系消息传递
针对一种关系R=<stype, etype, dtype>将dtype类型顶点在不同关系下的表示进行组合
:param out_dim: int 输出特征维数
:param num_heads: int 注意力头数K
:param rel_attn: nn.Parameter(K, d) 关系R的注意力向量
:param dropout: float, optional Dropout概率默认为0
:param negative_slope: float, optional LeakyReLU负斜率默认为0.2
"""
super().__init__()
self.out_dim = out_dim
self.num_heads = num_heads
self.rel_attn = rel_attn
self.dropout = nn.Dropout(dropout)
self.leaky_relu = nn.LeakyReLU(negative_slope)
def forward(self, feats):
"""
:param feats: tensor(N_R, N, K*d) dtype类型顶点在不同关系下的表示
:return: tensor(N, K*d) 跨关系消息传递后dtype类型顶点在关系R下的表示
"""
num_rel = feats.shape[0]
if num_rel == 1:
return feats.squeeze(dim=0)
feats = feats.view(num_rel, -1, self.num_heads, self.out_dim) # (N_R, N, K, d)
attn_scores = (self.rel_attn * feats).sum(dim=-1, keepdim=True)
attn_scores = F.softmax(self.leaky_relu(attn_scores), dim=0) # (N_R, N, K, 1)
out = (attn_scores * feats).sum(dim=0) # (N, K, d)
out = self.dropout(out.view(-1, self.num_heads * self.out_dim)) # (N, K*d)
return out
class RelationFusing(nn.Module):
def __init__(
self, node_hidden_dim, rel_hidden_dim, num_heads,
w_node, w_rel, dropout=0.0, negative_slope=0.2):
"""关系混合
针对一种顶点类型,将该类型顶点在不同关系下的表示进行组合
:param node_hidden_dim: int 顶点隐含特征维数
:param rel_hidden_dim: int 关系隐含特征维数
:param num_heads: int 注意力头数K
:param w_node: Dict[str, tensor(K, d_node, d_node)] 边类型到顶点关于该关系的特征转换矩阵的映射
:param w_rel: Dict[str, tensor(K, d_rel, d_node)] 边类型到关系的特征转换矩阵的映射
:param dropout: float, optional Dropout概率默认为0
:param negative_slope: float, optional LeakyReLU负斜率默认为0.2
"""
super().__init__()
self.node_hidden_dim = node_hidden_dim
self.rel_hidden_dim = rel_hidden_dim
self.num_heads = num_heads
self.w_node = nn.ParameterDict(w_node)
self.w_rel = nn.ParameterDict(w_rel)
self.dropout = nn.Dropout(dropout)
self.leaky_relu = nn.LeakyReLU(negative_slope)
def forward(self, node_feats, rel_feats):
"""
:param node_feats: Dict[str, tensor(N, K*d_node)] 边类型到顶点在该关系下的表示的映射
:param rel_feats: Dict[str, tensor(K*d_rel)] 边类型到关系的表示的映射
:return: tensor(N, K*d_node) 该类型顶点的最终嵌入
"""
etypes = list(node_feats.keys())
num_rel = len(node_feats)
if num_rel == 1:
return node_feats[etypes[0]]
node_feats = torch.stack([node_feats[e] for e in etypes], dim=0) \
.reshape(num_rel, -1, self.num_heads, self.node_hidden_dim) # (N_R, N, K, d_node)
rel_feats = torch.stack([rel_feats[e] for e in etypes], dim=0) \
.reshape(num_rel, self.num_heads, self.rel_hidden_dim) # (N_R, K, d_rel)
w_node = torch.stack([self.w_node[e] for e in etypes], dim=0) # (N_R, K, d_node, d_node)
w_rel = torch.stack([self.w_rel[e] for e in etypes], dim=0) # (N_R, K, d_rel, d_node)
# hn[r, n, h] @= wn[r, h] => hn[r, n, h, i] = ∑(k) hn[r, n, h, k] * wn[r, h, k, i]
node_feats = torch.einsum('rnhk,rhki->rnhi', node_feats, w_node) # (N_R, N, K, d_node)
# hr[r, h] @= wr[r, h] => hr[r, h, i] = ∑(k) hr[r, h, k] * wr[r, h, k, i]
rel_feats = torch.einsum('rhk,rhki->rhi', rel_feats, w_rel) # (N_R, K, d_node)
attn_scores = (node_feats * rel_feats.unsqueeze(dim=1)).sum(dim=-1, keepdim=True)
attn_scores = F.softmax(self.leaky_relu(attn_scores), dim=0) # (N_R, N, K, 1)
out = (attn_scores * node_feats).sum(dim=0) # (N_R, N, K, d_node)
out = self.dropout(out.view(-1, self.num_heads * self.node_hidden_dim)) # (N, K*d_node)
return out
class RHGNNLayer(nn.Module):
def __init__(
self, node_in_dim, node_out_dim, rel_in_dim, rel_out_dim, num_heads,
ntypes, etypes, dropout=0.0, negative_slope=0.2, residual=True):
"""R-HGNN层
:param node_in_dim: int 顶点输入特征维数
:param node_out_dim: int 顶点输出特征维数
:param rel_in_dim: int 关系输入特征维数
:param rel_out_dim: int 关系输出特征维数
:param num_heads: int 注意力头数K
:param ntypes: List[str] 顶点类型列表
:param etypes: List[(str, str, str)] 规范边类型列表
:param dropout: float, optional Dropout概率默认为0
:param negative_slope: float, optional LeakyReLU负斜率默认为0.2
:param residual: bool, optional 是否使用残差连接默认True
"""
super().__init__()
# 特定关系的卷积的参数
fc_node = {
ntype: nn.Linear(node_in_dim, num_heads * node_out_dim, bias=False)
for ntype in ntypes
}
fc_rel = {
etype: nn.Linear(rel_in_dim, 2 * num_heads * node_out_dim, bias=False)
for _, etype, _ in etypes
}
self.rel_graph_conv = nn.ModuleDict({
etype: RelationGraphConv(
node_out_dim, num_heads, fc_node[stype], fc_node[dtype], fc_rel[etype],
dropout, negative_slope, F.relu
) for stype, etype, dtype in etypes
})
# 残差连接的参数
self.residual = residual
if residual:
self.fc_res = nn.ModuleDict({
ntype: nn.Linear(node_in_dim, num_heads * node_out_dim) for ntype in ntypes
})
self.res_weight = nn.ParameterDict({
ntype: nn.Parameter(torch.rand(1)) for ntype in ntypes
})
# 关系表示学习的参数
self.fc_upd = nn.ModuleDict({
etype: nn.Linear(rel_in_dim, num_heads * rel_out_dim)
for _, etype, _ in etypes
})
# 跨关系消息传递的参数
rel_attn = {
etype: nn.Parameter(torch.FloatTensor(num_heads, node_out_dim))
for _, etype, _ in etypes
}
self.rel_cross = nn.ModuleDict({
etype: RelationCrossing(
node_out_dim, num_heads, rel_attn[etype], dropout, negative_slope
) for _, etype, _ in etypes
})
self.rev_etype = {
e: next(re for rs, re, rd in etypes if rs == d and rd == s and re != e)
for s, e, d in etypes
}
self.reset_parameters(rel_attn)
def reset_parameters(self, rel_attn):
gain = nn.init.calculate_gain('relu')
for etype in rel_attn:
nn.init.xavier_normal_(rel_attn[etype], gain=gain)
def forward(self, g, feats, rel_feats):
"""
:param g: DGLGraph 异构图
:param feats: Dict[(str, str, str), tensor(N_i, d_in)] 关系(三元组)到目标顶点输入特征的映射
:param rel_feats: Dict[str, tensor(d_in_rel)] 边类型到输入关系特征的映射
:return: Dict[(str, str, str), tensor(N_i, K*d_out)], Dict[str, tensor(K*d_out_rel)]
关系(三元组)到目标顶点在该关系下的表示的映射、边类型到关系表示的映射
"""
if g.is_block:
feats_dst = {r: feats[r][:g.num_dst_nodes(r[2])] for r in feats}
else:
feats_dst = feats
node_rel_feats = {
(stype, etype, dtype): self.rel_graph_conv[etype](
g[stype, etype, dtype],
(feats[(dtype, self.rev_etype[etype], stype)], feats_dst[(stype, etype, dtype)]),
rel_feats[etype]
) for stype, etype, dtype in g.canonical_etypes
if g.num_edges((stype, etype, dtype)) > 0
} # {rel: tensor(N_dst, K*d_out)}
if self.residual:
for stype, etype, dtype in node_rel_feats:
alpha = torch.sigmoid(self.res_weight[dtype])
inherit_feat = self.fc_res[dtype](feats_dst[(stype, etype, dtype)])
node_rel_feats[(stype, etype, dtype)] = \
alpha * node_rel_feats[(stype, etype, dtype)] + (1 - alpha) * inherit_feat
out_feats = {} # {rel: tensor(N_dst, K*d_out)}
for stype, etype, dtype in node_rel_feats:
dst_node_rel_feats = torch.stack([
node_rel_feats[r] for r in node_rel_feats if r[2] == dtype
], dim=0) # (N_Ri, N_i, K*d_out)
out_feats[(stype, etype, dtype)] = self.rel_cross[etype](dst_node_rel_feats)
rel_feats = {etype: self.fc_upd[etype](rel_feats[etype]) for etype in rel_feats}
return out_feats, rel_feats
class RHGNN(nn.Module):
def __init__(
self, in_dims, hidden_dim, out_dim, rel_in_dim, rel_hidden_dim, num_heads, ntypes,
etypes, predict_ntype, num_layers, dropout=0.0, negative_slope=0.2, residual=True):
"""R-HGNN模型
:param in_dims: Dict[str, int] 顶点类型到输入特征维数的映射
:param hidden_dim: int 顶点隐含特征维数
:param out_dim: int 顶点输出特征维数
:param rel_in_dim: int 关系输入特征维数
:param rel_hidden_dim: int 关系隐含特征维数
:param num_heads: int 注意力头数K
:param ntypes: List[str] 顶点类型列表
:param etypes: List[(str, str, str)] 规范边类型列表
:param predict_ntype: str 待预测顶点类型
:param num_layers: int 层数
:param dropout: float, optional Dropout概率默认为0
:param negative_slope: float, optional LeakyReLU负斜率默认为0.2
:param residual: bool, optional 是否使用残差连接默认True
"""
super().__init__()
self._d = num_heads * hidden_dim
self.etypes = etypes
self.predict_ntype = predict_ntype
# 对齐输入特征维数
self.fc_in = nn.ModuleDict({
ntype: nn.Linear(in_dim, num_heads * hidden_dim) for ntype, in_dim in in_dims.items()
})
# 关系输入特征
self.rel_embed = nn.ParameterDict({
etype: nn.Parameter(torch.FloatTensor(1, rel_in_dim)) for _, etype, _ in etypes
})
self.layers = nn.ModuleList()
self.layers.append(RHGNNLayer(
num_heads * hidden_dim, hidden_dim, rel_in_dim, rel_hidden_dim,
num_heads, ntypes, etypes, dropout, negative_slope, residual
))
for _ in range(1, num_layers):
self.layers.append(RHGNNLayer(
num_heads * hidden_dim, hidden_dim, num_heads * rel_hidden_dim, rel_hidden_dim,
num_heads, ntypes, etypes, dropout, negative_slope, residual
))
w_node = {
etype: nn.Parameter(torch.FloatTensor(num_heads, hidden_dim, hidden_dim))
for _, etype, _ in etypes
}
w_rel = {
etype: nn.Parameter(torch.FloatTensor(num_heads, rel_hidden_dim, hidden_dim))
for _, etype, _ in etypes
}
self.rel_fusing = nn.ModuleDict({
ntype: RelationFusing(
hidden_dim, rel_hidden_dim, num_heads,
{e: w_node[e] for _, e, d in etypes if d == ntype},
{e: w_rel[e] for _, e, d in etypes if d == ntype},
dropout, negative_slope
) for ntype in ntypes
})
self.classifier = nn.Linear(num_heads * hidden_dim, out_dim)
self.reset_parameters(self.rel_embed, w_node, w_rel)
def reset_parameters(self, rel_embed, w_node, w_rel):
gain = nn.init.calculate_gain('relu')
for etype in rel_embed:
nn.init.xavier_normal_(rel_embed[etype], gain=gain)
nn.init.xavier_normal_(w_node[etype], gain=gain)
nn.init.xavier_normal_(w_rel[etype], gain=gain)
def forward(self, blocks, feats):
"""
:param blocks: blocks: List[DGLBlock]
:param feats: Dict[str, tensor(N_i, d_in_i)] 顶点类型到输入顶点特征的映射
:return: tensor(N_i, d_out) 待预测顶点的最终嵌入
"""
feats = {
(stype, etype, dtype): self.fc_in[dtype](feats[dtype])
for stype, etype, dtype in self.etypes
}
rel_feats = {rel: emb.flatten() for rel, emb in self.rel_embed.items()}
for block, layer in zip(blocks, self.layers):
# {(stype, etype, dtype): tensor(N_i, K*d_hid)}, {etype: tensor(K*d_hid_rel)}
feats, rel_feats = layer(block, feats, rel_feats)
out_feats = {
ntype: self.rel_fusing[ntype](
{e: feats[(s, e, d)] for s, e, d in feats if d == ntype},
{e: rel_feats[e] for s, e, d in feats if d == ntype}
) for ntype in set(d for _, _, d in feats)
} # {ntype: tensor(N_i, K*d_hid)}
return self.classifier(out_feats[self.predict_ntype])
class RHGNNFull(RHGNN):
def forward(self, g, feats):
return super().forward([g] * len(self.layers), feats)